NEWS
divent 0.5-4.9001
Bug correction
- species distributions made of a single individual were not recognized correctly as abundance vectors, preventing the estimation of their diversity at a level.
- all arguments are available in
accum_sp_hill().
Improvement
- argument
richness_estimator has the same default value across functions.
divent 0.5-4 (2026-05-06)
Bug correction
metacommunity() ignored argument name.div_richness(..., as_numeric = TRUE) returned a value but did not print it.
Features
coverage.abundances() now accepts argument as_numeric.
divent 0.5-3 (2025-08-27)
Bug correction
species_distribution() raised an error when input was a vector of factors.
divent 0.5-2 (2025-02-09)
Features
- Generalized Simpson's entropy:
ent_gen_simpson() and div_gen_simpson()
- Faith's PD:
div_pd()
- Allen at al's phylogenetic entropy:
ent_allen()
- Spatially explicit Simpson's entropy:
ent_sp_simpson() and ent_sp_simpsonEnvelope()
- Spatially explicit random communities:
rspcommunity()
species_distribution methods for wmppp and character objects.- values of abundances are no longer limited to
.Machine$integer.max.
External changes
- Replaced
Geom*$default_aes by their values for compatibility with ggplot2 3.6.0 (PR #2 by @teunbrand)
divent 0.4-4 (2024-11-06)
Features
- Hurlbert's diversity:
ent_hurlbert() and div_hurlbert().
divent 0.3-16
Features
- Similarity and ordinariness of species.
- Similarity-based diversity:
ent_similarity() and div_similarity()
- Rao's quadratic entropy:
ent_rao().
- paracou_6_wmppp dataset.
divent 0.2-5
Features
- Data formats:
- phylo_divent (phylogenetic tree):
as_phylo_divent()
- Phylogenetic diversity:
ent_phylo() and div_phylo()
- species names must be valid names
divent 0.1-24
Features
- Data formats:
- species distribution:
species_distribution()
- metacommunity:
metacommunity()
- Sample coverage:
coverage()
- Richness:
div_richness()
- Shannon's, Simpson's and Tsallis's entropies:
ent_shannon(), ent_simpson(), ent_tsallis()
- Hill numbers:
div_hill()
- Diversity accumulation:
accum_hill()
- Diversity profiles:
profile_hill()
- Diversity partitioning:
profile_hill()